I'm not fussy. I stick with the factory jetting, except one bike that has a slightly rich pilot. Don't really need the choke to start it.
I think, like others said, something is wrong otherwise it would have run lean before. You really need to retrace your steps, starting from the cylinder back to the air filter.
One thing I have found with my 2000's is, on cold starts the bike rev's high at first, so to reduce any damage to the engine I throttle the choke lever to keep the rev's at a respectable level while she warms up. It only occurs in the first 20-30 seconds, but it's not good practice to wind up a cold engine.